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Achievements
Molecular mechanisms of the formation of Spemann organizer and coordinate regulation of cell movement during gastrulation
Yamashita, S., C. Miyagi, A. Carmany-Rampey, T. Shimizu, R. Fujii, A. F. Schier and T. Hirano. Stat3 controls cell movements during zebrafish gastrulation. Dev. Cell. 2: 363-375, 2002.(PubMed) (Evaluations and comments from leading biologists)




Introduction
The aim of this research project is to extend further our knowledge and experience obtained from the cytokine research and applied them to elucidation of the mechanisms by which cells of developing zebrafish or mice respond to secreted signaling factors including cytokines to specify cell fate and cell behavior, in particular axis determination, gastrulation, and regionalization. The formation of Spemann organizer is one of the most important steps in dorsoventral axis determination in vertebrate development. We have isolated a novel zebrafish homeobox gene, dharma, specifically expressed in Nieuwkoop center and essential for organizer formation and forebrain formation. The aim of this projects is the elucidation of the molecular mechanisms involved in organizer formation, gastrulation. We will apply the findings in zebrafish to mouse by performing gene-targeting of each responsible gene. The final goal of this project is the application of our findings to the understanding of the molecular mechanisms and control of human diseases. For this purpose, we are currently performing several projects as follows:
Previous studies
Our studies on cell cleavage after fertilaization have revealed that asymmetric p38 activation on one side of the blastodisc required for symmetric and synchronous cleavage (J. Cell Biol. 150:1335-1347, 2000). Our results suggest that dorsal determinants directly or indirectly induce asymmetric p38 activation which seems to be required for cleavage in only future dorsal side. to understand the molecular mechanisms of early development, we have identified several zebrafisf genes, such as dharma, dkk-1, ifez, fezl, pnx, and stat3. Among these two genes that are required for gastrulation, both of which are down stream of maternal Wnt/b-catenin pathway. We found that a novel zebrafish homeobox gene, dharma, which is induced by maternal Wnt/b-catenin pathway and capable of inducing the organizer ectopically (Genes & Development, 12: 2345-2353, 1998). Furthermore, dharma gene was found to be encoded by bozozok locus (Development, 126:1427-1438, 1999), establishing that dharma/bozozok is essential gene for gastrula organiser formation. In fact, dharma/boz and squint/nodal cooperatively induces organizer specific genes, such as goosecoid, chordin and dkk-1 (Mech. of Dev. 91, 293-303, 2000). We also found that Stat3 is activated in the dorsal region in a manner dependent on the maternal Wnt/b-catenin pathway. Most important finding is that Stat3 controls cell movements during gastrulation without affecting early cell fate specification (Developmental Cells, 2: 363-375, 2002).
Projects
1) Identification and cloning of molecules involved in dharma-induced organizer formation, forebrain formation and neural development in zebra fish utilizing subtraction, expression cloning and mutagenesis. (zebrafish)
2) Elucidation of the roles of the gp130/JAK /STAT signal transduciton pathway in gastrulation cell movements and identification of te ligand for gp130 and targets genes of the JAK/STAT3 signals involved in cell movements. (zebrafish and mouse)
3) Elucidation of the roles of MAPK, JNK and p38 and upstream signaling molecules related to these MAP kinase family molecules in development. (zebrafish and mouse)
4) Identification of dorsal determinants. (zebrafish)









Publication
- Yamashita, S., C. Miyagi, T. Fukada, N. Kagara, Y.-S. Che & T. Hirano. Zinc transporter LIVI controls epithelial-mesenchymal transition in zebrafish gastrula organizer. Nature, AOP, published online 5 May 2004; doi:10.1038/nature02545
- Yamashita, S., C. Miyagi, A. Carmany-Rampey, T. Shimizu, R. Fujii, A. F. Schier and T. Hirano. Stat3 controls cell movements during zebrafish gastrulation. Dev. Cell. 2: 363-375, 2002.(PubMed)
- Ryu, S.-L., R. Fujii, Y. Yamanaka, T. Shimizu, T. Yabe, T. Hirata, M. Hibi, and T. Hirano. Regulation of dharma/bozozok by the Wnt pathway. Dev. Biol. 2001 231:397-409, 2001 (PubMed)
- Muraoka, O., Ichikawa, H., Shi, H., Okamura, S., Taira, E., Higuchi, H., Hirano, T., Hibi, M., and Miki, N. Kheper, a novel ZFH/dEF1 family, regulates the development of the neuroectoderm of zebrafish (Danio rerio). Dev. Biol. 228:29-40, 2000.(PubMed)
- Park, H-C., Kim, C-H., Bae, Y-K., Yeo, S-Y., Kim, S-H., Hong, S-K., Shin, J., Hibi, M., Hirano, T., Miki, N., Chitnis, A.B., and Huh, T-L. Analysis of upstream elements in the HuC promoter leads to the establishment of transgenic zebrafish with fluorescent neurons. Dev. Biol. 227:279-293, 2000. (PubMed)
- Fujii, R., S. Yamashita, M. Hibi, and T. Hirano. Asymmetric p38 activation in zebrafish; its possible role in symmetric and synchronous cleavage. J. Cell Biol. 150:1335-1347, 2000 (PubMed) (Full Text in JCB). This is mentioned in the "In Brief" of the JCB.
- Hashimoto, H., T., Yabe, T. Hirata, T. Shimizu, Y.-K. Bae, Y. Yamanaka, T. Hirano, and M. Hibi. Expression of the zinc finger gene fez-like in zebrafish forebrain. Mechanisms of Development, 97:191-195, 2000 (PubMed)
- Hirata, T., Y. Yamanaka, S.-L. Ryu, T. Shimizu, T. Yabe, M. Hibi, and T. Hirano. Novel mix-family homeobox genes in zebrafish and their differential regulation. BBRC, 271:603-609, 2000.(PubMed).
- Itoh, M., Yoshida, Y., Nishida, K., Narimatsu, M., Hibi, M., and Hirano, T. A role of Gab1 for heart, placenta, and skin development, and growth factors- and cytokines-induced ERK MAP kinase activation. Mol. Cell. Biol. 20, 3695-3704, 2000.(PubMed)(Abstract)(Full Text in MCB)
- Shimizu, T., Y. Yamanaka, S.-L. Ryu, H. Hashimoto, T. Yabe, T. Hirata, Y.-K. Bae, M. Hibi, and T. Hirano. Cooperative roles of Bozozok/Dharma and Nodal-related proteins in the formation of the dorsal organizer in zebrafish. Mechanisms of Development, 91, 293-303, 2000.(Full Text)(PubMed)
- Hashimoto, H., M. Itoh, Y. Yamanaka, S. Yamashita, T. Shimizu, L. Solnica-Krezel, M. Hibi, and T. Hirano. Zebrafish Dkk1 Functions in Forebrain Specification and Axial Mesendoderm Formation. Developmental Biology 217, 138-152, 2000.(Abstract)(PubMed)
- Fekany, K., Y. Yamanaka, T. Leung, H. I. Sirotkin, J. Topczewski, M. A. Gates, M. Hibi, A. Renucci, D. Stemple, A. Radbill, A. F. Schier, W. Driver, T. Hirano, W. S. Talbot, and L. Solnica-Krezel. The zebrafish bozozok locus encodes Dharma, a homeodomain protein essential for induction of gastrula organizer and dorsoanterior embryonic structures. Development, 126:1427-1438, 1999. (Development), (PubMed)
- Kim, C.-H., Y.-K. Bae, Y. Yamanaka, S. Yamashita, T. Shimizu, R. Fujii, H.-C. Park, S.-Y. Yeo, T.-L. Huh, M. Hibi, and T. Hirano. Overexpression of neurogenin induces extopic expression of HuC in zebrafish. Neuroscience Letters 239:113-116, 1997.(PubMed)
- Yamanaka, Y., T. Mizuno, Y. Sasai, M. Kishi, H. Takeda, C.-H. Kim, M. Hibi and T. Hirano. A novel homeobox gene, dharma, can induce the organizer in a non-cell-autonomous manner. Genes & Development, 12: 2345-2353, 1998.(Abstract)(PubMed) (Full Text in G & D)

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